STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF67072.1Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). (246 aa)    
Predicted Functional Partners:
SHF19384.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.911
SHF68446.1
Cystine transport system permease protein.
 0.911
SHF47510.1
Polar amino acid transport system permease protein.
 0.910
SHF96997.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.906
SHF54244.1
L-cystine transport system permease protein.
 0.901
SHF54331.1
L-cystine transport system permease protein.
 
 0.901
SHF95010.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 0.901
SHF95032.1
L-cystine transport system permease protein.
 0.901
SHG10614.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 0.892
SHG12852.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.890
Your Current Organism:
Trichococcus flocculiformis
NCBI taxonomy Id: 82803
Other names: ATCC 51221, DSM 2094, T. flocculiformis, strain Echt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.