Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF19805.1 | SHF68416.1 | SAMN04488048_101249 | SAMN04488048_10952 | CRISPR-associated protein, Cas1 family. | Hypothetical protein. | 0.414 |
SHF67803.1 | SHF68416.1 | SAMN04488048_10931 | SAMN04488048_10952 | Phosphohistidine phosphatase SixA. | Hypothetical protein. | 0.414 |
SHF68347.1 | SHF68392.1 | SAMN04488048_10950 | SAMN04488048_10951 | Aconitate hydratase. | Hypothetical protein. | 0.410 |
SHF68347.1 | SHF68416.1 | SAMN04488048_10950 | SAMN04488048_10952 | Aconitate hydratase. | Hypothetical protein. | 0.410 |
SHF68392.1 | SHF68347.1 | SAMN04488048_10951 | SAMN04488048_10950 | Hypothetical protein. | Aconitate hydratase. | 0.410 |
SHF68392.1 | SHF68416.1 | SAMN04488048_10951 | SAMN04488048_10952 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHF68416.1 | SHF19805.1 | SAMN04488048_10952 | SAMN04488048_101249 | Hypothetical protein. | CRISPR-associated protein, Cas1 family. | 0.414 |
SHF68416.1 | SHF67803.1 | SAMN04488048_10952 | SAMN04488048_10931 | Hypothetical protein. | Phosphohistidine phosphatase SixA. | 0.414 |
SHF68416.1 | SHF68347.1 | SAMN04488048_10952 | SAMN04488048_10950 | Hypothetical protein. | Aconitate hydratase. | 0.410 |
SHF68416.1 | SHF68392.1 | SAMN04488048_10952 | SAMN04488048_10951 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHF68416.1 | SHG26512.1 | SAMN04488048_10952 | SAMN04488048_1539 | Hypothetical protein. | mRNA interferase RelE/StbE. | 0.778 |
SHF68416.1 | era | SAMN04488048_10952 | SAMN04488048_10294 | Hypothetical protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.414 |
SHG26512.1 | SHF68416.1 | SAMN04488048_1539 | SAMN04488048_10952 | mRNA interferase RelE/StbE. | Hypothetical protein. | 0.778 |
era | SHF68416.1 | SAMN04488048_10294 | SAMN04488048_10952 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein. | 0.414 |