STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF85286.1Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. (156 aa)    
Predicted Functional Partners:
SHF85257.1
Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase.
    
0.970
SHF85228.1
Hypothetical protein.
       0.527
SHF85316.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
       0.460
SHF85351.1
Hypothetical protein.
       0.412
SHF23112.1
Uncharacterized protein YoxC, contains an MCP-like domain.
   
    0.403
SHF17401.1
Hypothetical protein.
   
 
  0.402
SHF13944.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
  0.402
SHF24511.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
  0.402
SHF35817.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
  0.402
SHF34805.1
3-oxoacyl-[acyl-carrier protein] reductase.
   
 
  0.402
Your Current Organism:
Trichococcus flocculiformis
NCBI taxonomy Id: 82803
Other names: ATCC 51221, DSM 2094, T. flocculiformis, strain Echt
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