Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF34474.1 | SHF34506.1 | SAMN04488048_10388 | SAMN04488048_10389 | LPXTG-motif cell wall anchor domain-containing protein. | LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein. | 0.827 |
SHF34474.1 | SHF86510.1 | SAMN04488048_10388 | SAMN04488048_11466 | LPXTG-motif cell wall anchor domain-containing protein. | Lysophospholipase L1. | 0.563 |
SHF34474.1 | SHF94856.1 | SAMN04488048_10388 | SAMN04488048_11818 | LPXTG-motif cell wall anchor domain-containing protein. | Taurine transport system substrate-binding protein. | 0.532 |
SHF34474.1 | SHF94910.1 | SAMN04488048_10388 | SAMN04488048_11820 | LPXTG-motif cell wall anchor domain-containing protein. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.497 |
SHF34474.1 | SHF94936.1 | SAMN04488048_10388 | SAMN04488048_11821 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.443 |
SHF34506.1 | SHF34474.1 | SAMN04488048_10389 | SAMN04488048_10388 | LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.827 |
SHF34506.1 | SHF86510.1 | SAMN04488048_10389 | SAMN04488048_11466 | LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein. | Lysophospholipase L1. | 0.643 |
SHF34506.1 | SHF94856.1 | SAMN04488048_10389 | SAMN04488048_11818 | LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein. | Taurine transport system substrate-binding protein. | 0.470 |
SHF34506.1 | SHF94936.1 | SAMN04488048_10389 | SAMN04488048_11821 | LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein. | Hypothetical protein. | 0.410 |
SHF86510.1 | SHF34474.1 | SAMN04488048_11466 | SAMN04488048_10388 | Lysophospholipase L1. | LPXTG-motif cell wall anchor domain-containing protein. | 0.563 |
SHF86510.1 | SHF34506.1 | SAMN04488048_11466 | SAMN04488048_10389 | Lysophospholipase L1. | LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein. | 0.643 |
SHF86510.1 | SHF94856.1 | SAMN04488048_11466 | SAMN04488048_11818 | Lysophospholipase L1. | Taurine transport system substrate-binding protein. | 0.427 |
SHF94811.1 | SHF94833.1 | SAMN04488048_11816 | SAMN04488048_11817 | Oligopeptide transport system substrate-binding protein. | Taurine transport system ATP-binding protein. | 0.446 |
SHF94811.1 | SHF94856.1 | SAMN04488048_11816 | SAMN04488048_11818 | Oligopeptide transport system substrate-binding protein. | Taurine transport system substrate-binding protein. | 0.438 |
SHF94811.1 | SHF94886.1 | SAMN04488048_11816 | SAMN04488048_11819 | Oligopeptide transport system substrate-binding protein. | Taurine transport system permease protein. | 0.444 |
SHF94833.1 | SHF94811.1 | SAMN04488048_11817 | SAMN04488048_11816 | Taurine transport system ATP-binding protein. | Oligopeptide transport system substrate-binding protein. | 0.446 |
SHF94833.1 | SHF94856.1 | SAMN04488048_11817 | SAMN04488048_11818 | Taurine transport system ATP-binding protein. | Taurine transport system substrate-binding protein. | 0.982 |
SHF94833.1 | SHF94886.1 | SAMN04488048_11817 | SAMN04488048_11819 | Taurine transport system ATP-binding protein. | Taurine transport system permease protein. | 0.999 |
SHF94833.1 | SHF94910.1 | SAMN04488048_11817 | SAMN04488048_11820 | Taurine transport system ATP-binding protein. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.597 |
SHF94833.1 | SHF94936.1 | SAMN04488048_11817 | SAMN04488048_11821 | Taurine transport system ATP-binding protein. | Hypothetical protein. | 0.661 |
page 1 of 3