Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG07380.1 | SHG07409.1 | SAMN04488048_12526 | SAMN04488048_12527 | AAA domain (dynein-related subfamily). | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | 0.999 |
SHG07380.1 | SHG07439.1 | SAMN04488048_12526 | SAMN04488048_12528 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.631 |
SHG07380.1 | SHG07461.1 | SAMN04488048_12526 | SAMN04488048_12529 | AAA domain (dynein-related subfamily). | Jag N-terminus. | 0.812 |
SHG07380.1 | SHG20063.1 | SAMN04488048_12526 | SAMN04488048_13813 | AAA domain (dynein-related subfamily). | Helix-turn-helix domain-containing protein. | 0.419 |
SHG07409.1 | SHG07380.1 | SAMN04488048_12527 | SAMN04488048_12526 | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | AAA domain (dynein-related subfamily). | 0.999 |
SHG07409.1 | SHG07439.1 | SAMN04488048_12527 | SAMN04488048_12528 | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | Hypothetical protein. | 0.631 |
SHG07409.1 | SHG07461.1 | SAMN04488048_12527 | SAMN04488048_12529 | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | Jag N-terminus. | 0.812 |
SHG07409.1 | SHG20063.1 | SAMN04488048_12527 | SAMN04488048_13813 | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | Helix-turn-helix domain-containing protein. | 0.484 |
SHG07409.1 | leuC | SAMN04488048_12527 | SAMN04488048_10383 | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.613 |
SHG07409.1 | leuD | SAMN04488048_12527 | SAMN04488048_10384 | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.613 |
SHG07439.1 | SHG07380.1 | SAMN04488048_12528 | SAMN04488048_12526 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.631 |
SHG07439.1 | SHG07409.1 | SAMN04488048_12528 | SAMN04488048_12527 | Hypothetical protein. | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | 0.631 |
SHG07461.1 | SHG07380.1 | SAMN04488048_12529 | SAMN04488048_12526 | Jag N-terminus. | AAA domain (dynein-related subfamily). | 0.812 |
SHG07461.1 | SHG07409.1 | SAMN04488048_12529 | SAMN04488048_12527 | Jag N-terminus. | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | 0.812 |
SHG07461.1 | SHG20063.1 | SAMN04488048_12529 | SAMN04488048_13813 | Jag N-terminus. | Helix-turn-helix domain-containing protein. | 0.751 |
SHG20063.1 | SHG07380.1 | SAMN04488048_13813 | SAMN04488048_12526 | Helix-turn-helix domain-containing protein. | AAA domain (dynein-related subfamily). | 0.419 |
SHG20063.1 | SHG07409.1 | SAMN04488048_13813 | SAMN04488048_12527 | Helix-turn-helix domain-containing protein. | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | 0.484 |
SHG20063.1 | SHG07461.1 | SAMN04488048_13813 | SAMN04488048_12529 | Helix-turn-helix domain-containing protein. | Jag N-terminus. | 0.751 |
leuC | SHG07409.1 | SAMN04488048_10383 | SAMN04488048_12527 | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 5-methylcytosine-specific restriction endonuclease McrBC, regulatory subunit McrC. | 0.613 |
leuC | leuD | SAMN04488048_10383 | SAMN04488048_10384 | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.999 |
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