Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF28119.1 | SHF35182.1 | SAMN04488048_102186 | SAMN04488048_103111 | PTS system, mannose-specific IIB component. | Hypothetical protein. | 0.522 |
SHF28119.1 | SHF72167.1 | SAMN04488048_102186 | SAMN04488048_11047 | PTS system, mannose-specific IIB component. | Mannose-6-phosphate isomerase, type 1. | 0.929 |
SHF28119.1 | SHG00608.1 | SAMN04488048_102186 | SAMN04488048_12117 | PTS system, mannose-specific IIB component. | Hypothetical protein. | 0.522 |
SHF28119.1 | SHG00727.1 | SAMN04488048_102186 | SAMN04488048_12121 | PTS system, mannose-specific IIB component. | Hypothetical protein. | 0.522 |
SHF28119.1 | SHG10763.1 | SAMN04488048_102186 | SAMN04488048_12812 | PTS system, mannose-specific IIB component. | Hypothetical protein. | 0.524 |
SHF28119.1 | pgi | SAMN04488048_102186 | SAMN04488048_106148 | PTS system, mannose-specific IIB component. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.520 |
SHF35182.1 | SHF28119.1 | SAMN04488048_103111 | SAMN04488048_102186 | Hypothetical protein. | PTS system, mannose-specific IIB component. | 0.522 |
SHF35182.1 | SHF65195.1 | SAMN04488048_103111 | SAMN04488048_10876 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.781 |
SHF35182.1 | SHF72167.1 | SAMN04488048_103111 | SAMN04488048_11047 | Hypothetical protein. | Mannose-6-phosphate isomerase, type 1. | 0.582 |
SHF35182.1 | SHG00608.1 | SAMN04488048_103111 | SAMN04488048_12117 | Hypothetical protein. | Hypothetical protein. | 0.532 |
SHF35182.1 | SHG00727.1 | SAMN04488048_103111 | SAMN04488048_12121 | Hypothetical protein. | Hypothetical protein. | 0.695 |
SHF35182.1 | SHG10763.1 | SAMN04488048_103111 | SAMN04488048_12812 | Hypothetical protein. | Hypothetical protein. | 0.521 |
SHF35182.1 | pgi | SAMN04488048_103111 | SAMN04488048_106148 | Hypothetical protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.541 |
SHF35182.1 | ribBA | SAMN04488048_103111 | SAMN04488048_10878 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.542 |
SHF65195.1 | SHF35182.1 | SAMN04488048_10876 | SAMN04488048_103111 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.781 |
SHF65195.1 | SHG00608.1 | SAMN04488048_10876 | SAMN04488048_12117 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.781 |
SHF65195.1 | SHG00727.1 | SAMN04488048_10876 | SAMN04488048_12121 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.781 |
SHF65195.1 | SHG10763.1 | SAMN04488048_10876 | SAMN04488048_12812 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.781 |
SHF65195.1 | SHG10791.1 | SAMN04488048_10876 | SAMN04488048_12813 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Lactoylglutathione lyase. | 0.420 |
SHF65195.1 | ribBA | SAMN04488048_10876 | SAMN04488048_10878 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
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