STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG11732.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (274 aa)    
Predicted Functional Partners:
SHF26646.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.878
SHF35817.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
 0.714
SHF54738.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
  
 0.613
SHF96728.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
 
  
 0.604
SHF43869.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.567
SHF35236.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
  
 0.560
SHG12223.1
Short-chain dehydrogenase.
 
  
 
0.551
fabH
3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
    
 0.530
SHF24477.1
[acyl-carrier-protein] S-malonyltransferase.
    
 0.515
SHF24542.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.514
Your Current Organism:
Trichococcus flocculiformis
NCBI taxonomy Id: 82803
Other names: ATCC 51221, DSM 2094, T. flocculiformis, strain Echt
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.