Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG14799.1 | SHG14833.1 | SAMN04488048_1328 | SAMN04488048_1329 | DNA-binding transcriptional regulator, XRE family. | Hypothetical protein. | 0.723 |
SHG14799.1 | SHG14866.1 | SAMN04488048_1328 | SAMN04488048_13210 | DNA-binding transcriptional regulator, XRE family. | TrbC/VIRB2 family protein. | 0.649 |
SHG14799.1 | SHG14897.1 | SAMN04488048_1328 | SAMN04488048_13211 | DNA-binding transcriptional regulator, XRE family. | Hypothetical protein. | 0.474 |
SHG14799.1 | SHG14931.1 | SAMN04488048_1328 | SAMN04488048_13212 | DNA-binding transcriptional regulator, XRE family. | Type IV secretion system protein VirD4. | 0.436 |
SHG14799.1 | SHG14963.1 | SAMN04488048_1328 | SAMN04488048_13213 | DNA-binding transcriptional regulator, XRE family. | Hypothetical protein. | 0.418 |
SHG14833.1 | SHG14799.1 | SAMN04488048_1329 | SAMN04488048_1328 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE family. | 0.723 |
SHG14833.1 | SHG14866.1 | SAMN04488048_1329 | SAMN04488048_13210 | Hypothetical protein. | TrbC/VIRB2 family protein. | 0.693 |
SHG14833.1 | SHG14897.1 | SAMN04488048_1329 | SAMN04488048_13211 | Hypothetical protein. | Hypothetical protein. | 0.503 |
SHG14833.1 | SHG14931.1 | SAMN04488048_1329 | SAMN04488048_13212 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.462 |
SHG14833.1 | SHG14963.1 | SAMN04488048_1329 | SAMN04488048_13213 | Hypothetical protein. | Hypothetical protein. | 0.443 |
SHG14866.1 | SHG14799.1 | SAMN04488048_13210 | SAMN04488048_1328 | TrbC/VIRB2 family protein. | DNA-binding transcriptional regulator, XRE family. | 0.649 |
SHG14866.1 | SHG14833.1 | SAMN04488048_13210 | SAMN04488048_1329 | TrbC/VIRB2 family protein. | Hypothetical protein. | 0.693 |
SHG14866.1 | SHG14897.1 | SAMN04488048_13210 | SAMN04488048_13211 | TrbC/VIRB2 family protein. | Hypothetical protein. | 0.556 |
SHG14866.1 | SHG14931.1 | SAMN04488048_13210 | SAMN04488048_13212 | TrbC/VIRB2 family protein. | Type IV secretion system protein VirD4. | 0.508 |
SHG14866.1 | SHG14963.1 | SAMN04488048_13210 | SAMN04488048_13213 | TrbC/VIRB2 family protein. | Hypothetical protein. | 0.487 |
SHG14897.1 | SHG14799.1 | SAMN04488048_13211 | SAMN04488048_1328 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE family. | 0.474 |
SHG14897.1 | SHG14833.1 | SAMN04488048_13211 | SAMN04488048_1329 | Hypothetical protein. | Hypothetical protein. | 0.503 |
SHG14897.1 | SHG14866.1 | SAMN04488048_13211 | SAMN04488048_13210 | Hypothetical protein. | TrbC/VIRB2 family protein. | 0.556 |
SHG14897.1 | SHG14931.1 | SAMN04488048_13211 | SAMN04488048_13212 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.701 |
SHG14897.1 | SHG14963.1 | SAMN04488048_13211 | SAMN04488048_13213 | Hypothetical protein. | Hypothetical protein. | 0.669 |
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