Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SET06066.1Putative sensory transduction regulator. (134 aa)    
Predicted Functional Partners:
SET06032.1
Phage shock protein A (PspA) family protein.
 
     0.921
SET06099.1
Helix-turn-helix.
 
     0.865
SET05927.1
Protein of unknown function.
 
     0.836
SET05856.1
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain.
 
     0.797
SET05791.1
ATPase family associated with various cellular activities (AAA).
 
     0.757
SET06000.1
Hypothetical protein.
       0.554
SET05965.1
Hypothetical protein.
       0.507
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
     0.480
SES87851.1
Erythromycin esterase.
  
     0.453
Your Current Organism:
Hymenobacter actinosclerus
NCBI taxonomy Id: 82805
Other names: CCUG 39621, CIP 106628, DSM 15310, H. actinosclerus, Hymenobacter actinosclerus Collins et al. 2000
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