STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET73413.1Outer membrane protein TolC. (438 aa)    
Predicted Functional Partners:
SET73395.1
Membrane fusion protein, multidrug efflux system.
 
  0.957
SET73378.1
Major Facilitator Superfamily protein.
 
 
  0.930
SET69451.1
Membrane fusion protein, multidrug efflux system.
 
  0.870
SES74740.1
Membrane fusion protein, multidrug efflux system.
 
  0.800
SET69428.1
Hypothetical protein.
 
 
  0.716
SET73440.1
Transcriptional regulator, AraC family.
 
     0.703
SET13694.1
Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.594
SET44201.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.593
SET44230.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.590
SES78688.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.588
Your Current Organism:
Hymenobacter actinosclerus
NCBI taxonomy Id: 82805
Other names: CCUG 39621, CIP 106628, DSM 15310, H. actinosclerus, Hymenobacter actinosclerus Collins et al. 2000
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