STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET88560.1Molybdate transporter of MFS superfamily protein. (400 aa)    
Predicted Functional Partners:
sbcD
Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
   
   0.776
SEU02116.1
Phospholipase_D-nuclease N-terminal.
  
     0.735
SET47813.1
Ankyrin repeat-containing protein.
  
 
 
 0.734
SET06722.1
Por secretion system C-terminal sorting domain-containing protein.
    
   0.707
SET82635.1
NADH dehydrogenase subunit M.
   
 
 0.700
SES95756.1
Hypothetical protein.
    
 
 0.687
SEU08611.1
Amino acid adenylation domain-containing protein.
  
 
 0.678
SES79603.1
Choline dehydrogenase.
  
     0.653
SET96733.1
Amino acid adenylation domain-containing protein.
   
 
 0.562
SET88580.1
Adenylyltransferase and sulfurtransferase.
       0.519
Your Current Organism:
Hymenobacter actinosclerus
NCBI taxonomy Id: 82805
Other names: CCUG 39621, CIP 106628, DSM 15310, H. actinosclerus, Hymenobacter actinosclerus Collins et al. 2000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.