STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET92851.1Uncharacterized protein YqfA, UPF0365 family. (361 aa)    
Predicted Functional Partners:
SET92837.1
NfeD-like C-terminal, partner-binding.
 
    0.991
SET92822.1
Transcription elongation factor GreB.
       0.545
SET05856.1
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain.
   
  
 0.495
Your Current Organism:
Hymenobacter actinosclerus
NCBI taxonomy Id: 82805
Other names: CCUG 39621, CIP 106628, DSM 15310, H. actinosclerus, Hymenobacter actinosclerus Collins et al. 2000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.