STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET92871.1WD40-like Beta Propeller Repeat. (681 aa)    
Predicted Functional Partners:
SEU07450.1
Gliding motility-associated C-terminal domain-containing protein.
  
    0.682
SET84446.1
WD40-like Beta Propeller Repeat.
  
   0.667
SEU01162.1
Outer membrane protein OmpA.
 
  
0.622
SET83175.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  0.609
SES77835.1
Hypothetical protein.
  
 
   0.607
SES92917.1
Helix-hairpin-helix motif-containing protein.
  
     0.606
SEU06113.1
Hypothetical protein.
  
 
   0.586
SET89764.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.563
SET93812.1
Hypothetical protein.
  
 
   0.554
SES80745.1
Hypothetical protein.
  
   0.538
Your Current Organism:
Hymenobacter actinosclerus
NCBI taxonomy Id: 82805
Other names: CCUG 39621, CIP 106628, DSM 15310, H. actinosclerus, Hymenobacter actinosclerus Collins et al. 2000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.