Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ40737.1 | AKJ42968.1 | QQ39_00510 | QQ39_13575 | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.683 |
AKJ40737.1 | maeA | QQ39_00510 | QQ39_10920 | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
AKJ42966.1 | AKJ42968.1 | QQ39_13565 | QQ39_13575 | Streptomycin kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
AKJ42966.1 | yfgJ | QQ39_13565 | QQ39_13570 | Streptomycin kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Primosomal protein N' (replication factor Y) - superfamily II helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
AKJ42968.1 | AKJ40737.1 | QQ39_13575 | QQ39_00510 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.683 |
AKJ42968.1 | AKJ42966.1 | QQ39_13575 | QQ39_13565 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Streptomycin kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
AKJ42968.1 | maeA | QQ39_13575 | QQ39_10920 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.556 |
AKJ42968.1 | tusD | QQ39_13575 | QQ39_01570 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfur transfer complex subunit TusD; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE. | 0.406 |
AKJ42968.1 | yfgJ | QQ39_13575 | QQ39_13570 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Primosomal protein N' (replication factor Y) - superfamily II helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
maeA | AKJ40737.1 | QQ39_10920 | QQ39_00510 | Malate dehydrogenase; Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
maeA | AKJ42968.1 | QQ39_10920 | QQ39_13575 | Malate dehydrogenase; Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.556 |
tusD | AKJ42968.1 | QQ39_01570 | QQ39_13575 | Sulfur transfer complex subunit TusD; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.406 |
yfgJ | AKJ42966.1 | QQ39_13570 | QQ39_13565 | Primosomal protein N' (replication factor Y) - superfamily II helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Streptomycin kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
yfgJ | AKJ42968.1 | QQ39_13570 | QQ39_13575 | Primosomal protein N' (replication factor Y) - superfamily II helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |