STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR62_219954-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)    
Predicted Functional Partners:
CR62_21985
4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
CR62_22000
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.986
arnT
Catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
CR62_21980
UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.957
CR62_21975
Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.893
CR62_21970
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.838
CR62_17690
Copper-sensitivity protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
CR62_10385
Lipopolysaccharide biosynthesis protein WzzE; Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
CR62_14975
CadC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
CR62_04840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
Your Current Organism:
Serratia grimesii
NCBI taxonomy Id: 82995
Other names: ATCC 14460, CCUG 15721, CIP 103361, DSM 30063, IFO 13537, JCM 5910, LMG 7883, LMG:7883, NBRC 13537, NCTC 11543, NRRL B-4271, S. grimesii
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