STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAJ02502.1Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)    
Predicted Functional Partners:
KAJ02503.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.913
KAJ02501.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.864
KAJ03716.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KAJ02484.1
Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.753
KAJ03449.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
KAJ03448.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
KAJ02401.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the trimethylamine methyltransferase family.
  
     0.731
KAJ04527.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
KAJ04171.1
NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.632
KAJ03830.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.632
Your Current Organism:
Sulfitobacter mediterraneus
NCBI taxonomy Id: 83219
Other names: ATCC 700856, DSM 12244, JCM 21792, S. mediterraneus, strain CH-B427
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.