close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANO03210.1long-chain-acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)    
Predicted Functional Partners:
ANO03211.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.713
ANO02200.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.671
ANO02844.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.664
ANO03976.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.664
ANO03901.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.637
ANO04013.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.634
ANO04014.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.616
ANO02795.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.591
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.577
ANO03209.1
long-chain-acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.543
Your Current Organism:
Mycobacteroides immunogenum
NCBI taxonomy Id: 83262
Other names: ATCC 700505, CCUG 47286, DSM 45595, JCM 12691, M. immunogenum, MC 779, Mycobacterium immunogenum, Mycobacterium immunogenum Wilson et al. 2001, Mycobacteroides immunogenum (Wilson et al. 2001) Gupta et al. 2018, strain BH29
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.