Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS38951.1Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. (333 aa)    
Predicted Functional Partners:
AMS40835.1
TtuD3 hydroxypyruvate reductase; Pfam:pfam13660 Domain of unknown function (DUF4147).
 
 0.937
AMS44390.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
 
  
 0.934
AMS40087.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
 
  
0.923
AMS43816.1
Hypothetical protein; Pfam:pfam00155 Aminotransferase class I and II.
 
 
  0.919
AMS42686.1
Hypothetical protein; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase.
 
  
  0.918
AMS44057.1
2-hydroxy-acid oxidase; Pfam:pfam01565 FAD binding domain.
   
 0.912
AMS44060.1
FAD-binding protein; Pfam:pfam02913 FAD linked oxidases, C-terminal domain.
   
 0.912
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.910
glcB-2
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.910
AMS42402.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the hyi family.
   
 
 0.908
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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