STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AMS38972.1Putative tricarboxylic transport membrane protein; Pfam:pfam07331 Tripartite tricarboxylate transporter TctB family. (162 aa)    
Predicted Functional Partners:
AMS38973.1
C4-dicarboxylate ABC transporter substrate-binding protein; Pfam:pfam03401 Tripartite tricarboxylate transporter family receptor.
 
 
 0.996
AMS38971.1
Pfam:pfam01970 Tripartite tricarboxylate transporter TctA family.
 
  
 0.931
AMS41265.1
MFS transporter; Pfam:pfam03401 Tripartite tricarboxylate transporter family receptor.
 
  
 0.795
AMS42194.1
Hypothetical protein; Pfam:pfam03401 Tripartite tricarboxylate transporter family receptor.
 
  
 0.755
AMS42192.1
Hypothetical protein; Pfam:pfam01970 Tripartite tricarboxylate transporter TctA family.
 
  
 0.695
AMS40122.1
Hypothetical protein; Pfam:pfam01970 Tripartite tricarboxylate transporter TctA family.
 
  
 0.673
AMS40126.1
Pfam:pfam03401 Tripartite tricarboxylate transporter family receptor.
 
  
 0.648
AMS38974.1
Iron ABC transporter; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
     0.551
AMS38976.1
Hypothetical protein; Pfam:pfam08521 Two-component sensor kinase N-terminal.
 
     0.545
AMS42193.1
Membrane protein; Pfam:pfam07331 Tripartite tricarboxylate transporter TctB family.
  
     0.506
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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