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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS38988.1Peptidase M22; Pfam:pfam00814 Glycoprotease family. (227 aa)    
Predicted Functional Partners:
AMS39699.1
Hypothetical protein; Pfam:pfam02367 Uncharacterized P-loop hydrolase UPF0079.
 
 
 0.975
tsaD
Protein kinase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.963
AMS38987.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
  
 
 0.884
AMS38986.1
Pfam:pfam01553 Acyltransferase.
  
  
 0.745
AMS41866.1
Biotin; Pfam:pfam03099 Biotin/lipoate A/B protein ligase family.
 
    0.681
recR
Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
 
 
 0.634
AMS41226.1
Hypothetical protein; Pfam:pfam08279 HTH domain.
  
    0.573
tadA
CMP deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.571
AMS40439.1
CMP deaminase; Pfam:pfam00383 Cytidine and deoxycytidylate deaminase zinc-binding region.
 
  
 0.514
AMS43580.1
Phage SPO1 DNA polymerase-like protein; Pfam:pfam03167 Uracil DNA glycosylase superfamily.
  
    0.508
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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