STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS38990.1Hydantoinase; Pfam:pfam01968 Hydantoinase/oxoprolinase. (672 aa)    
Predicted Functional Partners:
AMS40418.1
Hypothetical protein; Pfam:pfam02538 Hydantoinase B/oxoprolinase.
 
 
 0.761
AMS43347.1
Pfam:pfam02538 Hydantoinase B/oxoprolinase.
 
 
 0.740
AMS40092.1
Pfam:pfam02538 Hydantoinase B/oxoprolinase.
 
 
 0.733
AMS44287.1
Methyltransferase; Pfam:pfam06253 Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
  
     0.728
AMS39413.1
Methylhydantoinase; Pfam:pfam02538 Hydantoinase B/oxoprolinase.
 
 
 0.714
AMS40818.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
     0.616
AMS41453.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
     0.602
AMS41897.1
Dimethylglycine dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase; Belongs to the GcvT family.
 
    0.579
AMS40816.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
    0.545
AMS41430.1
Tetratricopeptide repeat protein.
  
     0.545
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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