STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS38991.1Iron-binding protein; Pfam:pfam06902 Divergent 4Fe-4S mono-cluster. (212 aa)    
Predicted Functional Partners:
AMS40551.1
Acetyltransferase; Pfam:pfam14542 GCN5-related N-acetyl-transferase.
  
  
 0.949
AMS42838.1
3-beta hydroxysteroid dehydrogenase; Pfam:pfam13460 NADH(P)-binding.
   
    0.644
AMS39298.1
General stress protein.
   
    0.612
AMS41641.1
Hypothetical protein.
  
     0.460
arcA
Arginine deiminase; Pfam:pfam02274 Amidinotransferase.
   
    0.455
AMS38990.1
Hydantoinase; Pfam:pfam01968 Hydantoinase/oxoprolinase.
       0.438
AMS39625.1
Hypothetical protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.434
AMS43137.1
CsbD family protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.434
AMS42522.1
Type VI secretion protein; Pfam:pfam05638 Protein of unknown function (DUF796).
  
     0.423
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.