Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS38992.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
AMS43139.1
NIPSNAP family containing protein; Pfam:pfam07978 NIPSNAP.
     0.751
AMS42016.1
Abortive infection protein.
  
     0.688
AMS43310.1
Phosphotransferase; Pfam:pfam00485 Phosphoribulokinase / Uridine kinase family.
  
     0.544
AMS40803.1
Isomerase; Pfam:pfam12680 SnoaL-like domain.
 
    0.512
AMS40212.1
Methyltransferase type 11; Pfam:pfam08242 Methyltransferase domain.
  
     0.510
AMS43374.1
Hypothetical protein.
  
     0.507
AMS40645.1
Hypothetical protein.
 
    0.493
AMS43496.1
Oxidoreductase, short chain dehydrogenase/reductase family; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
     0.489
AMS40745.1
ATPase; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
  
     0.472
AMS43517.1
Pfam:pfam00106 short chain dehydrogenase.
  
    0.459
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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