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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39013.1C4-dicarboxylate ABC transporter. (318 aa)    
Predicted Functional Partners:
AMS39014.1
TRAP transporter, 4TM/12TM fusion protein; Pfam:pfam06808 DctM-like transporters.
 
 
 0.994
AMS39015.1
Hypothetical protein; Pfam:pfam08905 Domain of unknown function (DUF1850).
 
    0.910
AMS43262.1
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family; Pfam:pfam03480 Bacterial extracellular solute-binding protein, family 7.
  
   
 0.518
AMS39012.1
Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
       0.512
AMS40083.1
TRAP transporter-DctP subunit; Pfam:pfam03480 Bacterial extracellular solute-binding protein, family 7.
  
   
 0.509
gltS
Glutamate permease; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
 
    0.484
AMS40086.1
Hypothetical protein; Pfam:pfam06808 DctM-like transporters.
  
     0.470
AMS43260.1
ABC transporter, membrane spanning protein; Pfam:pfam06808 DctM-like transporters.
  
     0.448
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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