Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS39079.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
AMS41250.1
Hypothetical protein.
  
     0.747
AMS43604.1
Hypothetical protein.
  
     0.746
AMS40694.1
Membrane protein.
  
     0.725
AMS40411.1
Pfam:pfam06698 Protein of unknown function (DUF1192).
  
     0.701
AMS43603.1
Hypothetical protein.
  
     0.685
AMS44083.1
Phasin; Pfam:pfam09361 Phasin protein.
  
     0.684
AMS44199.1
Hypothetical protein.
  
     0.679
AMS43729.1
Hypothetical protein.
  
     0.675
AMS42476.1
Phasin; Pfam:pfam09361 Phasin protein.
  
     0.670
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.651
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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