STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39101.1Spermidine/putrescine ABC transporter, permease protein. (301 aa)    
Predicted Functional Partners:
AMS39102.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.989
AMS39100.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.953
AMS39590.1
Spermidine/putrescine ABC transporter ATP-binding protein.
  
 0.905
ydcV_6
Putative spermidine/putrescine ABC transporter, permease protein.
  
 0.893
AMS44087.1
Putrescine/spermidine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.890
AMS39385.1
Spermidine/putrescine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.888
AMS41054.1
Putrescine/spermidine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.863
AMS41055.1
Putrescine/spermidine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.863
AMS41115.1
Spermidine/putrescine-binding periplasmic protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
  
 0.862
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.860
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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