STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39124.1Iron ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (320 aa)    
Predicted Functional Partners:
AMS39125.1
Hypothetical protein; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.998
AMS39123.1
Hypothetical protein; Pfam:pfam01497 Periplasmic binding protein.
 
  
 0.994
AMS39126.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
 
  
 0.993
AMS39798.1
Pfam:pfam00005 ABC transporter.
 
  
 0.797
AMS40793.1
Phosphonate-transporting ATPase; Pfam:pfam00005 ABC transporter.
 
  
 0.683
AMS44184.1
Pfam:pfam00005 ABC transporter.
 
  
 0.652
hmuV
Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
     0.612
AMS39118.1
Siderophore synthetase component; Pfam:pfam04183 IucA / IucC family.
       0.608
AMS39121.1
Phosphopantetheine-binding protein.
  
    0.604
AMS39122.1
3-dehydroshikimate dehydratase; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
       0.580
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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