STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39135.1TonB-dependent receptor plug; Pfam:pfam00593 TonB dependent receptor. (766 aa)    
Predicted Functional Partners:
AMS39113.1
Hypothetical protein; Pfam:pfam03544 Gram-negative bacterial TonB protein C-terminal.
 
 
 0.876
AMS40329.1
TolA, TolA protein.
  
 
 0.809
AMS39138.1
Pdz/dhr/glgf family protein; Pfam:pfam04187 Protein of unknown function, DUF399.
 
  
 0.761
AMS39136.1
ABC transporter with fused ATPase and permease domains for long chain FA substrate; Pfam:pfam06472 ABC transporter transmembrane region 2.
 
     0.658
AMS39137.1
Hemin transport protein HmuS; Pfam:pfam05171 Haemin-degrading HemS.
  
  
 0.644
AMS41151.1
Hypothetical protein.
   
 
 0.628
AMS41325.1
Hypothetical protein; Pfam:pfam14339 Domain of unknown function (DUF4394).
   
 
 0.628
AMS39115.1
Anti-FecI sigma factor, FecR; Pfam:pfam04773 FecR protein.
 
  
 0.627
AMS39112.1
Hypothetical protein; Pfam:pfam02472 Biopolymer transport protein ExbD/TolR.
 
  
 0.549
AMS40791.1
Iron(III) dicitrate-binding protein; Pfam:pfam01497 Periplasmic binding protein.
 
  
 0.537
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.