Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39135.1TonB-dependent receptor plug; Pfam:pfam00593 TonB dependent receptor. (766 aa)    
Predicted Functional Partners:
AMS39113.1
Hypothetical protein; Pfam:pfam03544 Gram-negative bacterial TonB protein C-terminal.
 
 
 0.844
AMS40329.1
TolA, TolA protein.
  
 
 0.759
AMS39136.1
ABC transporter with fused ATPase and permease domains for long chain FA substrate; Pfam:pfam06472 ABC transporter transmembrane region 2.
 
     0.656
AMS39137.1
Hemin transport protein HmuS; Pfam:pfam05171 Haemin-degrading HemS.
  
  
 0.638
AMS39115.1
Anti-FecI sigma factor, FecR; Pfam:pfam04773 FecR protein.
 
  
 0.633
AMS39138.1
Pdz/dhr/glgf family protein; Pfam:pfam04187 Protein of unknown function, DUF399.
 
  
 0.576
AMS40360.1
Outer membrane autotransporter barrel domain-containing protein; Pfam:pfam03797 Autotransporter beta-domain.
 
 
 
 0.552
AMS40436.1
Hypothetical protein; Pfam:pfam03797 Autotransporter beta-domain.
 
 
 
 0.540
AMS39112.1
Hypothetical protein; Pfam:pfam02472 Biopolymer transport protein ExbD/TolR.
 
  
 0.536
AMS39297.1
Hypothetical protein; Pfam:pfam03797 Autotransporter beta-domain.
 
 
 
 0.531
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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