Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS39146.1Pfam:pfam08125 Mannitol dehydrogenase C-terminal domain. (503 aa)    
Predicted Functional Partners:
AMS43660.1
Carbohydrate kinase; Pfam:pfam00294 pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.957
xylA
Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the xylose isomerase family.
    
 0.946
AMS41896.1
Hypothetical protein; Pfam:pfam00702 haloacid dehalogenase-like hydrolase.
    
 0.908
AMS39149.1
Mannitol ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.889
AMS39150.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.850
AMS39151.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
 
  
 0.844
AMS39147.1
Pfam:pfam00106 short chain dehydrogenase.
  
 0.764
AMS39152.1
DeoR family transcriptional regulator; Pfam:pfam04198 Putative sugar-binding domain.
 
   
 0.694
AMS43723.1
HAD family hydrolase; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase.
   
 0.689
AMS39148.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
 
  
 0.658
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.