STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39159.1Hypothetical protein; Pfam:pfam00356 Bacterial regulatory proteins, lacI family. (332 aa)    
Predicted Functional Partners:
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
    
 
 0.793
AMS40914.1
LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain.
  
     0.758
AMS39254.1
Transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain.
  
     0.752
AMS40848.1
Transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain.
  
     0.736
AMS39241.1
Hypothetical protein; Pfam:pfam13377 Periplasmic binding protein-like domain.
  
     0.734
AMS39158.1
Hypothetical protein; Pfam:pfam00480 ROK family.
 
  
 0.638
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.620
AMS39702.1
Hypothetical protein; Pfam:pfam00381 PTS HPr component phosphorylation site.
   
 
 0.521
AMS39161.1
Asparaginase; Pfam:pfam01112 Asparaginase.
  
   
 0.447
AMS40027.1
Hypothetical protein; Pfam:pfam13407 Periplasmic binding protein domain.
 
  
 0.411
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.