Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39170.1Pfam:pfam10003 Integral membrane protein (DUF2244). (164 aa)    
Predicted Functional Partners:
AMS43741.1
Pfam:pfam06170 Protein of unknown function (DUF983).
  
     0.723
AMS39171.1
Pfam:pfam01035 6-O-methylguanine DNA methyltransferase, DNA binding domain.
       0.718
AMS42778.1
Pfam:pfam06170 Protein of unknown function (DUF983).
  
     0.702
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.701
AMS39497.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.613
AMS44143.1
Pfam:pfam11164 Protein of unknown function (DUF2948).
  
     0.588
AMS41869.1
Pfam:pfam07330 Protein of unknown function (DUF1467).
  
     0.558
AMS40399.1
TPR repeat-containing protein; Pfam:pfam13414 TPR repeat.
  
     0.535
AMS40654.1
Pfam:pfam11306 Protein of unknown function (DUF3108).
  
     0.525
AMS43740.1
Hypothetical protein; Pfam:pfam02104 SURF1 family.
 
    0.472
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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