Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
AMS39186.1Cell division protein DivIVA; Pfam:pfam03968 OstA-like protein. (193 aa)    
Predicted Functional Partners:
AMS39185.1
Pfam:pfam00005 ABC transporter.
  
  
 0.980
AMS39187.1
Hypothetical protein; Pfam:pfam06835 Lipopolysaccharide-assembly, LptC-related.
 
   
 0.894
lptD
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
 
 0.876
AMS41033.1
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal; Belongs to the flagella basal body rod proteins family.
    
   0.673
bamA
Outer membrane protein assembly factor yaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.670
AMS39184.1
RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.666
AMS39183.1
Pfam:pfam02482 Sigma 54 modulation protein / S30EA ribosomal protein.
 
   
 0.665
AMS39188.1
Clp protease; Pfam:pfam01343 Peptidase family S49.
 
     0.595
AMS42721.1
Peptidyl-prolyl cis-trans isomerase; Pfam:pfam13145 PPIC-type PPIASE domain.
 
  
 0.592
AMS40954.1
Hypothetical protein; Pfam:pfam01380 SIS domain; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.547
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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