Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMS39187.1Hypothetical protein; Pfam:pfam06835 Lipopolysaccharide-assembly, LptC-related. (239 aa)    
Predicted Functional Partners:
AMS39186.1
Cell division protein DivIVA; Pfam:pfam03968 OstA-like protein.
 
   
 0.894
AMS39185.1
Pfam:pfam00005 ABC transporter.
       0.845
AMS39190.1
Hypothetical protein.
 
     0.790
AMS40312.1
Hypothetical protein.
  
     0.725
AMS39181.1
Pfam:pfam06620 Protein of unknown function (DUF1150).
  
     0.678
AMS44204.1
Membrane protein.
  
     0.653
AMS40191.1
Pfam:pfam07940 Heparinase II/III-like protein.
  
     0.648
lptD
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.647
AMS41726.1
Hypothetical protein.
  
     0.625
AMS42326.1
Hypothetical protein.
  
     0.617
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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