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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39200.1Hemolysin; Pfam:pfam13444 Acetyltransferase (GNAT) domain. (293 aa)    
Predicted Functional Partners:
AMS38986.1
Pfam:pfam01553 Acyltransferase.
 
  
 0.925
AMS39201.1
Hypothetical protein; Pfam:pfam04237 YjbR.
       0.781
AMS39202.1
Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
       0.709
AMS42800.1
Ser/threonine protein phosphatase.
 
    0.562
AMS39199.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.543
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.509
AMS43735.1
Protein involved in C-type cytochrome biogenesis; Pfam:pfam11412 Disulphide bond corrector protein DsbC.
 
     0.419
AMS40972.1
Pfam:pfam01432 Peptidase family M3.
  
     0.412
AMS42744.1
ATP-binding protein; Pfam:pfam08904 Domain of unknown function (DUF1849).
  
     0.410
AMS42272.1
ATPase AAA; Pfam:pfam05673 Protein of unknown function (DUF815).
  
     0.407
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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