STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39234.1L-glyceraldehyde 3-phosphate reductase; Pfam:pfam00248 Aldo/keto reductase family. (350 aa)    
Predicted Functional Partners:
AMS39235.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.729
AMS39236.1
Hypothetical protein; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
  
 0.710
AMS39241.1
Hypothetical protein; Pfam:pfam13377 Periplasmic binding protein-like domain.
 
   
 0.564
AMS39481.1
Oxidoreductase; Pfam:pfam00248 Aldo/keto reductase family.
 
 
0.549
AMS39239.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.538
AMS39238.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.530
AMS39237.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.522
AMS39233.1
Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
    0.520
AMS39806.1
Pfam:pfam00248 Aldo/keto reductase family.
 
 
0.516
AMS43659.1
Transporter; Pfam:pfam05025 RbsD / FucU transport protein family; Belongs to the RbsD / FucU family.
 
     0.479
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.