Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39241.1Hypothetical protein; Pfam:pfam13377 Periplasmic binding protein-like domain. (360 aa)    
Predicted Functional Partners:
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
    
 
 0.843
AMS39159.1
Hypothetical protein; Pfam:pfam00356 Bacterial regulatory proteins, lacI family.
  
     0.734
AMS40571.1
Hypothetical protein; Pfam:pfam13377 Periplasmic binding protein-like domain.
  
     0.731
AMS39702.1
Hypothetical protein; Pfam:pfam00381 PTS HPr component phosphorylation site.
   
 
 0.620
AMS39240.1
ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
  
 0.618
AMS39234.1
L-glyceraldehyde 3-phosphate reductase; Pfam:pfam00248 Aldo/keto reductase family.
 
     0.560
AMS39236.1
Hypothetical protein; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
  
 0.532
AMS39238.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   
 0.516
AMS39239.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.480
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.412
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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