close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39241.1Hypothetical protein; Pfam:pfam13377 Periplasmic binding protein-like domain. (360 aa)    
Predicted Functional Partners:
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
    
 
 0.793
AMS39159.1
Hypothetical protein; Pfam:pfam00356 Bacterial regulatory proteins, lacI family.
  
     0.734
AMS40571.1
Hypothetical protein; Pfam:pfam13377 Periplasmic binding protein-like domain.
  
     0.731
AMS39240.1
ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
  
 0.616
AMS39234.1
L-glyceraldehyde 3-phosphate reductase; Pfam:pfam00248 Aldo/keto reductase family.
 
   
 0.564
AMS39236.1
Hypothetical protein; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
    0.529
AMS39702.1
Hypothetical protein; Pfam:pfam00381 PTS HPr component phosphorylation site.
   
 
 0.521
AMS39238.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   
 0.518
AMS39239.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.488
AMS39250.1
Alpha-glucosidase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
  
 0.403
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.