STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39268.1Pfam:pfam02423 Ornithine cyclodeaminase/mu-crystallin family. (306 aa)    
Predicted Functional Partners:
AMS39270.1
Hypothetical protein; Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
  
 0.788
AMS39269.1
Hypothetical protein; Pfam:pfam01925 Sulfite exporter TauE/SafE.
       0.779
AMS39834.1
Arginase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
  
 
 0.583
AMS39271.1
Ferredoxin; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
  
    0.576
AMS41560.1
Proclavaminate amidinohydrolase Pah; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
  
 
 0.545
AMS41584.1
Putative SpeB Arginase/agmatinase/formimionoglutamate hydrolase SpeB; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
  
 
 0.545
AMS39272.1
Hypothetical protein.
  
    0.543
AMS40262.1
4-hydroxyproline epimerase; Pfam:pfam05544 Proline racemase; Belongs to the proline racemase family.
 
   
 0.501
AMS39273.1
Ferredoxin.
 
    0.470
AMS39274.1
Aldehyde dehydrogenase; Pfam:pfam14518 Iron-containing redox enzyme.
 
     0.468
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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