STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39277.1Hypothetical protein; Pfam:pfam01266 FAD dependent oxidoreductase. (419 aa)    
Predicted Functional Partners:
AMS41464.1
Pfam:pfam00155 Aminotransferase class I and II.
 
  
 0.917
hisC
Pfam:pfam00155 Aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.902
AMS43555.1
Pfam:pfam00155 Aminotransferase class I and II.
   
 
 0.902
AMS39580.1
Pfam:pfam00155 Aminotransferase class I and II.
    
 0.901
AMS40982.1
Pfam:pfam00155 Aminotransferase class I and II.
    
 0.901
AMS40885.1
Sarcosine oxidase subunit alpha; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 
 0.740
AMS41906.1
(2Fe-2S)-binding protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 
 0.740
AMS40262.1
4-hydroxyproline epimerase; Pfam:pfam05544 Proline racemase; Belongs to the proline racemase family.
 
   
 0.707
AMS40260.1
Pfam:pfam00701 Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
   
 0.603
AMS39279.1
Amidase; Pfam:pfam01425 Amidase; Belongs to the amidase family.
  
    0.556
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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