Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMS39298.1General stress protein. (158 aa)    
Predicted Functional Partners:
AMS40837.1
Biotin synthase; Pfam:pfam04055 Radical SAM superfamily.
 
     0.644
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
  
 0.637
AMS39625.1
Hypothetical protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.600
AMS40001.1
Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core.
 
     0.600
AMS40540.1
Histidine kinase.
  
     0.594
AMS43137.1
CsbD family protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.562
AMS40545.1
Hypothetical protein; Pfam:pfam07536 HWE histidine kinase.
  
     0.561
AMS40836.1
Hypothetical protein; Pfam:pfam13566 Domain of unknown function (DUF4130.
 
     0.558
AMS39722.1
Hypothetical protein; Pfam:pfam01501 Glycosyl transferase family 8.
   
  
 0.553
AMS40536.1
Pfam:pfam07536 HWE histidine kinase.
  
     0.547
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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