Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39318.1Isocitrate lyase; Pfam:pfam05717 IS66 Orf2 like protein. (115 aa)    
Predicted Functional Partners:
AMS39319.1
Transposase IS3/IS911 family protein.
 
  
 0.942
AMS39317.1
Transposase IS66; Pfam:pfam13005 zinc-finger binding domain of transposase IS66.
 
   
 0.911
AMS39316.1
Transposase; Pfam:pfam03050 Transposase IS66 family.
 
   
 0.896
AMS44013.1
Hypothetical protein; Pfam:pfam03050 Transposase IS66 family.
 
   
 0.793
AMS39350.1
Hypothetical protein; Pfam:pfam01527 Transposase.
 
  
 0.667
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
  0.500
glcB-2
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
  0.500
AMS39903.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
  0.500
AMS43915.1
Transposase; Pfam:pfam00665 Integrase core domain.
 
     0.500
AMS43914.1
ATPase AAA; Pfam:pfam01695 IstB-like ATP binding protein.
 
     0.428
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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