Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AMS39333.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
AMS39334.1
Hypothetical protein; Pfam:pfam14378 PAP2 superfamily.
 
    
0.834
AMS39327.1
Hypothetical protein; Pfam:pfam13400 Putative Flp pilus-assembly TadE/G-like.
 
     0.643
AMS39332.1
Peptidase A24A prepilin type IV.
       0.592
AMS42091.1
Plasmid partitioning protein ParB; Pfam:pfam02195 ParB-like nuclease domain.
 
     0.538
AMS43466.1
2-acyl-glycerophospho-ethanolamine acyltransferase; Pfam:pfam00501 AMP-binding enzyme.
 
 
 0.536
AMS39324.1
Pilus assembly protein; Pfam:pfam13614 AAA domain.
 
     0.468
AMS39047.1
Pfam:pfam00067 Cytochrome P450.
  
 0.454
AMS39330.1
Flp pilus assembly protein CpaB.
 
     0.454
AMS39563.1
Hypothetical protein; Pfam:pfam00067 Cytochrome P450.
  
 0.454
AMS40432.1
Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme.
  
 
  0.447
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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