STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39384.1Hypothetical protein; Pfam:pfam00733 Asparagine synthase. (506 aa)    
Predicted Functional Partners:
AMS41637.1
Asparagine synthase; Pfam:pfam13537 Glutamine amidotransferase domain.
  
  
 
0.925
argG
Pfam:pfam00764 Arginosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.922
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.922
pyrB
Pfam:pfam00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.920
AMS41381.1
Aspartate racemase; Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
    
 0.912
AMS42667.1
Aspartate racemase; Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
    
 0.912
AMS39580.1
Pfam:pfam00155 Aminotransferase class I and II.
    
 0.907
AMS40982.1
Pfam:pfam00155 Aminotransferase class I and II.
    
 0.907
AMS41464.1
Pfam:pfam00155 Aminotransferase class I and II.
    
 0.907
AMS42905.1
L-aspartate oxidase; Pfam:pfam00890 FAD binding domain.
     
 0.902
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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