AMS39392.1 protein (Aminobacter aminovorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AMS39392.1

Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family. (353 aa)

Predicted Functional Partners:

AMS39389.1

0.562

AMS39390.1

0.562

AMS39391.1

0.556

AMS39388.1

0.529

AMS39393.1

0.487

AMS40513.1

0.457

hutH

0.457

AMS44197.1

0.408

AMS42070.1

0.404

Your Current Organism:

Aminobacter aminovorans

NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMS39388.1	AMS39389.1	AA2016_0449	AA2016_0450	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	Amino acid ABC transporter permease.	0.582
AMS39388.1	AMS39390.1	AA2016_0449	AA2016_0451	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	0.582
AMS39388.1	AMS39391.1	AA2016_0449	AA2016_0452	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.	0.593
AMS39388.1	AMS39392.1	AA2016_0449	AA2016_0453	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.	0.529
AMS39388.1	AMS39393.1	AA2016_0449	AA2016_0454	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.	0.425
AMS39389.1	AMS39388.1	AA2016_0450	AA2016_0449	Amino acid ABC transporter permease.	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	0.582
AMS39389.1	AMS39390.1	AA2016_0450	AA2016_0451	Amino acid ABC transporter permease.	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	0.874
AMS39389.1	AMS39391.1	AA2016_0450	AA2016_0452	Amino acid ABC transporter permease.	Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.	0.996
AMS39389.1	AMS39392.1	AA2016_0450	AA2016_0453	Amino acid ABC transporter permease.	Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.	0.562
AMS39390.1	AMS39388.1	AA2016_0451	AA2016_0449	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	0.582
AMS39390.1	AMS39389.1	AA2016_0451	AA2016_0450	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	Amino acid ABC transporter permease.	0.874
AMS39390.1	AMS39391.1	AA2016_0451	AA2016_0452	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.	0.947
AMS39390.1	AMS39392.1	AA2016_0451	AA2016_0453	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.	0.562
AMS39391.1	AMS39388.1	AA2016_0452	AA2016_0449	Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	0.593
AMS39391.1	AMS39389.1	AA2016_0452	AA2016_0450	Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.	Amino acid ABC transporter permease.	0.996
AMS39391.1	AMS39390.1	AA2016_0452	AA2016_0451	Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	0.947
AMS39391.1	AMS39392.1	AA2016_0452	AA2016_0453	Amino acid ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.	Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.	0.556
AMS39392.1	AMS39388.1	AA2016_0453	AA2016_0449	Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.	ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.	0.529
AMS39392.1	AMS39389.1	AA2016_0453	AA2016_0450	Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.	Amino acid ABC transporter permease.	0.562
AMS39392.1	AMS39390.1	AA2016_0453	AA2016_0451	Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.	Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.	0.562

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About