STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39444.1Thiol oxidoreductase; Pfam:pfam06537 Protein of unknown function (DUF1111). (536 aa)    
Predicted Functional Partners:
AMS39445.1
Peptidase M75, Imelysin; Pfam:pfam09375 Imelysin.
 
  
 0.983
AMS39446.1
Tat (Twin-arginine translocation) pathway signal sequence domain protein; Pfam:pfam07433 Protein of unknown function (DUF1513).
 
  
 0.977
AMS39442.1
Peptidase; Pfam:pfam09375 Imelysin.
 
  
 0.957
AMS39443.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
     0.819
AMS39085.1
Tat pathway signal protein; Pfam:pfam10029 Predicted periplasmic protein (DUF2271).
   
    0.582
AMS43707.1
Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
    0.470
AMS39087.1
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
    0.452
AMS43940.1
Nitrous oxide reductase accessory protein NosX, ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
    0.452
AMS44081.1
Iron ABC transporter substrate-binding protein; Pfam:pfam13343 Bacterial extracellular solute-binding protein.
 
    0.449
AMS39086.1
Pfam:pfam00175 Oxidoreductase NAD-binding domain.
  
    0.400
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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