Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39457.1HAD family hydrolase; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase. (218 aa)    
Predicted Functional Partners:
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
  
    0.814
AMS42134.1
Aminoglycoside phosphotransferase; Pfam:pfam13671 AAA domain.
  
    0.663
AMS39458.1
2-methylisocitrate lyase; Pfam:pfam13714 Phosphoenolpyruvate phosphomutase.
  
    0.628
AMS39455.1
Lrp-like protein; Pfam:pfam13404 AsnC-type helix-turn-helix domain.
       0.601
AMS39453.1
Pfam:pfam13230 Glutamine amidotransferases class-II.
 
     0.533
AMS39454.1
Capsular biosynthesis protein CpsJ.
       0.442
AMS43648.1
Alpha-glucosidase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
  
 0.416
AMS39250.1
Alpha-glucosidase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
  
 0.407
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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