Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39468.1Transcriptional activator FtrA; Pfam:pfam12833 Helix-turn-helix domain. (221 aa)    
Predicted Functional Partners:
AMS41976.1
AraC family transcriptional regulator; Pfam:pfam12833 Helix-turn-helix domain.
  
     0.694
AMS39469.1
Pfam:pfam06441 Epoxide hydrolase N terminus.
 
     0.624
AMS39814.1
Alkylhydroperoxidase like protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.572
AMS39813.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family.
  
    0.555
AMS39471.1
Dihydrofolate reductase; Pfam:pfam01872 RibD C-terminal domain.
 
     0.515
AMS39503.1
MerR family transcriptional regulator.
  
 
 0.462
AMS40366.1
NmrA family transcriptional regulator; Pfam:pfam13460 NADH(P)-binding.
 
     0.462
AMS42016.1
Abortive infection protein.
 
     0.417
AMS40876.1
AraC family transcriptional regulator; Pfam:pfam12833 Helix-turn-helix domain.
  
     0.416
AMS43535.1
DNA-binding domain-containing protein, AraC-type; Pfam:pfam12852 Cupin.
  
     0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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