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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39469.1Pfam:pfam06441 Epoxide hydrolase N terminus. (374 aa)    
Predicted Functional Partners:
AMS39934.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.687
AMS39468.1
Transcriptional activator FtrA; Pfam:pfam12833 Helix-turn-helix domain.
 
     0.624
AMS43725.1
Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.593
AMS39471.1
Dihydrofolate reductase; Pfam:pfam01872 RibD C-terminal domain.
 
    0.589
AMS39470.1
Dihydrofolate reductase.
  
    0.524
AMS43582.1
XRE family transcriptional regulator.
  
    0.522
AMS42408.1
Globin; Pfam:pfam01152 Bacterial-like globin.
  
     0.521
AMS40366.1
NmrA family transcriptional regulator; Pfam:pfam13460 NADH(P)-binding.
 
  
 0.518
AMS43879.1
Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain.
  
 
 0.486
AMS39842.1
Fuconate dehydratase; Pfam:pfam13378 Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.484
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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