Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMS39483.1Hypothetical protein; Pfam:pfam00593 TonB dependent receptor. (716 aa)    
Predicted Functional Partners:
AMS39113.1
Hypothetical protein; Pfam:pfam03544 Gram-negative bacterial TonB protein C-terminal.
 
 
 0.848
AMS40329.1
TolA, TolA protein.
  
 
 0.759
AMS42011.1
Hypothetical protein; Pfam:pfam01497 Periplasmic binding protein.
 
  
 0.714
hmuV
Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.586
AMS39115.1
Anti-FecI sigma factor, FecR; Pfam:pfam04773 FecR protein.
 
  
 0.570
AMS42010.1
Iron transporter; Pfam:pfam05171 Haemin-degrading HemS.
 
  
 0.555
AMS41151.1
Hypothetical protein.
   
 
 0.515
AMS41325.1
Hypothetical protein; Pfam:pfam14339 Domain of unknown function (DUF4394).
   
 
 0.515
AMS39297.1
Hypothetical protein; Pfam:pfam03797 Autotransporter beta-domain.
  
 
 
 0.510
AMS40360.1
Outer membrane autotransporter barrel domain-containing protein; Pfam:pfam03797 Autotransporter beta-domain.
  
 
 
 0.499
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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