STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39490.1Pfam:pfam00535 Glycosyl transferase family 2. (286 aa)    
Predicted Functional Partners:
AMS39488.1
Pfam:pfam00908 dTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.848
AMS39489.1
Putative dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
   
 0.832
AMS40789.1
Pfam:pfam00535 Glycosyl transferase family 2.
  
     0.752
AMS44207.1
Hypothetical protein; Pfam:pfam00535 Glycosyl transferase family 2.
 
     0.747
AMS40788.1
Pfam:pfam00535 Glycosyl transferase family 2.
  
     0.744
AMS39997.1
Pfam:pfam00535 Glycosyl transferase family 2.
  
     0.702
AMS42948.1
UDP-phosphate glucose phosphotransferase; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.699
AMS39986.1
Pfam:pfam00535 Glycosyl transferase family 2.
  
     0.630
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.540
murJ
Multidrug transporter MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
     
 0.528
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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