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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39492.1Pfam:pfam00582 Universal stress protein family. (163 aa)    
Predicted Functional Partners:
AMS43025.1
Hypothetical protein; Pfam:pfam09608 Putative transmembrane protein (Alph_Pro_TM).
 
     0.788
AMS44234.1
Hypothetical protein; Pfam:pfam09608 Putative transmembrane protein (Alph_Pro_TM).
 
     0.788
AMS43024.1
Permease; Pfam:pfam01925 Sulfite exporter TauE/SafE.
 
   
 0.787
AMS44235.1
Permease; Pfam:pfam01925 Sulfite exporter TauE/SafE.
 
   
 0.787
AMS41355.1
Hypothetical protein; Pfam:pfam04380 Membrane fusogenic activity.
  
     0.670
AMS39493.1
Iron transporter; Pfam:pfam08712 Scaffold protein Nfu/NifU N terminal.
     
 0.560
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.559
AMS44223.1
Tellurite resistance protein TerB.
  
     0.553
AMS44331.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.515
AMS40644.1
Signal peptide protein; Pfam:pfam13449 Esterase-like activity of phytase.
  
     0.500
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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